Monday, December 26, 2011

Spider brains and the evolution of computation

Brains have a big return on investment ...

Tiniest of Spiders Are Loaded With Brains, Researchers Find - NYTimes

... In the smallest spiders, Dr. Eberhard and his colleagues found, the central nervous systems filled nearly 80 percent of the cephalothorax, or body cavity, including 25 percent of the legs.

“The brain tissue of the nervous tissue is metabolically expensive,” he said. “These little spiders are paying a very large price to keep these brains functioning.”

At times, that price includes a deformed body cavity bulging with brain matter, which may in turn compromise the size of the digestive system, Dr. Eberhard said....

Were spider brains this big 200 million years ago? Across all organisms, are brains bigger than they once were? Across all worlds, where does computation stop having positive evolutionary returns?

Saturday, December 24, 2011

The "War on Chrismas" is not entirely delusional

The American "War on Christmas" movement seems thoroughly silly ....

Reminder: Tis the Season Not to Be an Ass – Whatever

...it’s about as silly as it ever was, considering that Christmas has conquered December, occupied November and metastasized into late October. To suggest that the holiday is under serious threat from politically correct non-Christians is like suggesting an earthworm is a serious threat to a Humvee. This is obvious enough to anyone with sense that I use The War on Christmas as an emergency diagnostic, which is to say, if you genuinely believe there’s a War on Christmas, you may want to see a doctor, since you might have a tumor pressing on your frontal lobes.

Seems silly, is silly.

And yet, I agree with TNC that Rick Perry is not completely delusional ...

Rick Perry and the Politics of Resentment - Ta-Nehisi Coates - Politics - The Atlantic

... What strikes me is the sense of being under siege, a constant theme in conservative politics. It is as if time itself is against them. And they know it. The line "I'm not ashamed to admit that I'm a Christian" stands out. Who is ashamed of this? This is a predominantly Christian country, and one of the most religious in the West. People don't "admit" their Christianity here. They proclaim it -- as the president has done repeatedly.

But what if there's something else? What if the conservatives are more perceptive and honest than the moderate liberals? I love Grant and Lincoln, but they were dead wrong in claiming that emancipation did not promote "social equality." Meanwhile the bigots who asserted that emancipation meant that Sambo would be "marryin yer daughters" were right. I wouldn't be shocked if Grant and Lincoln knew this, but also knew that to admit as much would be suicidal...

Yes, to most of the world the US seems to border on theocracy. But I was born into a true western theocracy, and it fell apart in less than 10 years ...

Quiet Revolution - Quebec History

The Quiet Revolution is the name given to a period of Quebec history extending from 1960 to 1966...

... The first major change that took place during the Quiet Revolution was the large-scale rejection of past values. Chief among these are those that Michel Brunet called “les trois dominantes de la pensée canadienne-française: l’agriculturisme, le messianisme et l’anti-étatisme” [the three main components of French Canadian thought: agriculturalism, anti-statism and messianism]. In this respect, Quebec entered resolutely into a phase of modernisation: its outlook became more secular (as opposed to religious), much of the traditionalism that characterised the past was replaced by increasingly liberal attitudes; long standing demographic tendencies, associated with a traditional rural way of life (high marriage, birth and fertility rates), were rapidly reversed ...

Quebec seemed stuck in the past -- until it lurched into the future. Societies can change very quickly.

Consider the case of the 2012 Presidential campaign. The GOP's presidential candidate will be theologically non-Christian (though culturally mainstream Protestant). The Dems candidate will be mainstream Protestant but raised partly in Islamic Indonesia.

That seems different, even if the current candidates aren't as theologically extreme as Jefferson, Adams or Madison. I would not be surprised if the religious attitudes of 2020 America were similar to those of 2000 Britain.

The religious right is right to be afraid, but wrong to think there's a conspiracy they can fight. Their foe is history, and it's hard to fight history. Just ask al Qaeda.

Thursday, December 22, 2011

US carrier locking of post-contract iPhones - a critique

AT&T will not unlock an iPhone under any circumstances. Together with their SMS pricing this has odd results (including a glut of former iPhones).

Verizon and Sprint claim they'll allow unlocking, but the reality is more complex  (emphases mine)...

How U.S. Carriers Fool You Into Thinking Your iPhone 4S Is Unlocked - Forbes

... What consumers need to understand is that there are actually four different versions of the iPhone 4S: Verizon, Sprint, AT&T, and Apple. Only the Apple phone, available from their stores or on-line, is fully unlocked and can be used on any carrier. The other phones are permanently locked and cannot ever be used on another carrier in the U.S. Even if you spend $800 for an unlocked phone as I did and dedicate it to a single U.S. carrier, you are locked into that carrier forever if you want to keep using the iPhone. Neither Apple or the other carriers will fully unlock your carrier phone.

Apple declined to return phone calls and emails to discuss this matter. However, the high level technical support supervisor that I spoke with at length indicated that she personally thought that customers should be warned about the different versions of the phones and ramifications of buying a phone directly from a carrier rather than Apple. A senior spokesperson for Verizon told me that all Verizon phones are locked to their network and she did not quite understand the problem. I am willing to bet that Verizon customers would precisely understand this issue, even if she did not.

So if you paid retail for your iPhone 4S and purchased it from Verizon, Sprint, AT&T or Best Buy, you will never be able to use that phone with a different carrier. In my view, this is a scam by these companies. I think the cellular providers should tell their customers up front that locked phones really mean that you are locked into the carrier forever. While all of these phones are iPhone 4S with the identical hardware, the difference is that if you purchase your phone directly from Apple, it is truly a universal device and will allow you to change carriers without the penalty of making the phone worthless.

I would urge the Carriers, FCC, or Courts to enforce the following rules to protect cellular customers in the United States: consumers buying new cell phones must be informed of the existence of any SIM LOCK (also known as a network lock) on their phone before sale; wireless phone companies must unlock handsets upon request, without fee, when a consumer purchases a new phone outright (unsubsidized) without a contract; wireless phone companies must unlock handsets upon request, without fee, when a consumer comes to the end of their contract, or at any time thereafter. Carriers must fully unlock their phones (as does Apple with the iPhone 4S) and not partially unlock the phone to block access to other carriers and deny consumers the right to choose any provider anywhere...

Carrier locking of iPhones is a nasty trick on consumers. It reduces the value of a post-contract iPhone; I wonder if a clever lawyer could sue carriers for theft. Another lawyer might find the shared policies a sign of illegal collusion or price-fixing among carriers.

Senator Franken - this is right up your alley!

See also:

Wednesday, December 21, 2011

Did canine distemper arise from measles in the new world?

(I wrote this 9/2011, but I was mistakenly left as a draft until now.)

Six years ago I read that new world dogs (canis familiaris) died in large numbers after the European invasion.

So what killed the Amerindian dog?

I assumed it was some European plague, and I suspected distemper.
I'd guess distemper. Recently I read that wild African dogs are now dying of epidemic distemper. Seems to fit. The Euros carried viruses that killed many of the native americans, it's not surprising that their dogs would have done the same thing.
Recently I read of a twist to this story
Evidence of a New World Origin for Canine Distemper -- Uhl et al. 25 (1): 613.4 -- The FASEB Journal 
.... The historical, epidemiological, paleopathological and molecular evidence supports the hypothesis that canine distemper arose in the New World from MV after the European conquest....
The Europeans brought Measles from the old world. In the new world it produced massive epidemics with astounding mortality. Tens of millions of native Americans died of Measles and other Old World diseases.

As is seen with other plagues, under these circumstances the measles virus jumped species. It went from humans to their dogs. It may have been even more lethal in the dogs of the 1500s.

Why didn't it then go back to Europe and wipe out the European dog? Did the virus adapt to its new host so it became less lethal? Could a historian who knew what to look for find evidence of massive die offs in European dogs in the 16th century?

I suspect we'll find out in the next year or two.

Syphilis - again a New World invention?

Decades ago physicians were taught that syphilis was a New World disease. The Europeans brought smallpox, and Amerindians returned syphilis. This was not a comparable exchange, smallpox and its kin killed most of the Amerindians (and another disease killed New World dogs). Syphilis, even at its worst, was not quite so deadly.

By the 1980s though, when I studied medicine, we were taught that syphilis was probably an Old World disease.

Saturday, December 17, 2011

Netbooks

Dell has ended their Netbook line.

That leaves Google's Chromebooks, which aren't exactly exciting.

I wasn't just a little wrong about Netbooks, I was incredibly, unbelievably, totally wrong. Again.

I mean, this is friggin' ridiculous.

What happened?

I suppose it was the pocket computer. People with iPhones and the Android equivalent are already paying for most of what a Netbook can do. It doesn't make sense to pay for an extra monthly data plan, and a Netbook without net access is kind of a bust.

That leaves Windows notebooks, which are cheap but crummy. And MacBook Airs, which are not cheap but very amazing.

There's still the grade school and perhaps junior high school marketplace, but the iPad and Android equivalents are squeezing there too.

The Netbook looks like an evolutionary dead end. Maybe we'd have taken that road, but the iPhone blew a hole in it by mid-2007. I was writing in 2009; the bloody 3G was out then!

Damnit Netbook, you made a fool of me.

See also:

Google, Blogger and the Machine

Does anyone reading this still happily use Blogger?

If so, please comment below or comment on this companion G+ public post.

I'm testing a theory, related to this old Marissa Mayer quote:

Two Schools of Thought: The Key Difference Between Apple and Google

... "It looks like a human was involved in choosing what went where,” Marissa Mayer once told an upset team of designers about a product design she rejected. “It looks too editorialized. Google products are machine-driven. They’re created by machines. And that is what makes us powerful. That’s what makes our products great.”...

More when I get my results.

No, I don't need a denominator.

Update: Fixed a bad link.

Thursday, December 15, 2011

Will Friedman win Salon's hack list 2011?

Last year Friedman came in third. Will he win this year?

Welcome to the 2011 Salon Hack List

Update: Darn! Friedman has been retired. Too predictably hackish to put on the list any longer.

And you thought the Jobs bio made him seem nasty ...

The Jobs bio makes him look pretty nasty, but apparently some of his nastiest bits didn't make the cut ...
AppleInsider | Steve Jobs refused to talk philanthropy with biographer
... any comments that were hurtful to individuals and served no purpose in the book were left out ...

Monday, December 12, 2011

A family doc's perspective on the best way to die

As a former family doc, I loved Ken Murray's essay on how doctor's die.

Is it true?

I suspect it's mostly true of family docs and some surgeons who are older and whose children are grown. I don't think it's true of younger physicians, especially those with children. My physician friend Tom fought his glioma very hard. He probably got an extra 1-2 years out of his suffering, and for his young family that was worth a lot.

I think I'd put myself through a lot to get my young kids a year or two.

When the kids are grown though, my physician wife and I have always imagined the kind of management Ken describes. Like most physicians, we're skeptical about how much medicine can really do for most end-of-life conditions. There's a difference between treatments that are statistically beneficial and treatments that make a really important difference.

After all, we know how the story ends.

Organizing human cognition: Lessons from CERN

There's a hierarchy in big time science schools, and physics holds the crown. (Math majors are in a different league.) Physicists are, face it, smarter than the rest of us -- and they know it.

Our only consolation is that they often work for a pittance.

So, from my perspective as a corporate ant, it's fascinating to read John Conway's description of how physicists organize their collaboration on history's biggest physics project (emphases mine)...
Making the (Higgs) Sausage | Cosmic Variance | Discover Magazine
For the past year, physicists at the LHC experiments CMS and ATLAS have been analyzing ever–increasing data samples from the huge machine. Rumors are now circulating about what the experiments might announce at next week’s presentations at CERN regarding the search for the Higgs boson.
... As you probably know, each of the two big experiments has over 3000 physicists participating, from all over the world. Many, but by no means the majority, are resident at CERN; most are at their home institutions in Europe, North America, and Asia and elsewhere.
The main thing that allows us to collaborate on a global scale like this is video conferencing. We used a system called EVO, developed at Caltech, which allows us to schedule meetings and connect to them from a laptop or desktop computer, or even dial in by phone ...the experiments have gravitated toward having meetings in the late afternoon, Europe time, which makes it early morning for people like me in California.
.., In CMS, our whole system of producing physics results has a sort of pyramidal structure. Each experiment has a number of physics analysis groups which meet a weekly or biweekly, typically, and have two “conveners” who set the agenda and run the meetings. These convener positions are typically held by senior people in the collaboration such as professors or senior lab scientists, for two years at a stretch, one convener changing out each year. They report to an overall physics coordinator and his or her deputies.
Within the physics analysis groups are subgroups devoted to sets of analyses which share common themes, common tools, or similar approaches. Each of these subgroups in turn is led by a pair of conveners who establish the ongoing analyses and guide them to eventual approval within physics analysis group.
We have what I think is a pretty impressive internal website devoted to tracking the progress of each physics analysis. From a single website you can drill down into a particular physics group find the analysis you want get links to all the documentation, and follow what’s happening. In parallel, there is a web system for recording the material presented at every meeting.
The goal of every analysis is to be approved by its physics group, so it can be shown in public at conferences and seminars. This requires having complete documentation including internal notes with full details of the analysis, and a “public analysis summary” which is available to the public, and which often serves as the basis for a peer–reviewed paper which soon follows.
Every analysis is assigned an analysis review committee of three to five people with experience in the topic, who act as a sort of hit squad, keeping the analyzers on their toes with questions and comments at every stage of the analysis, both on the actual analysis details and on the documentation. After all, if we are not our own worst critics, someone else will gladly fill the role!
In parallel with processing the data that we record, we run full simulations of well–known standard model collision processes which represent our background when we are doing searches for new particles. There is a big organizational challenge in doing these simulations, which run on a worldwide grid of computers devoted to CMS data analysis. We make use of the Open Science Grid for this in the US, the EuroGrid in Europe, and other clusters scattered all around the world, comprising tens of thousands of computing nodes.
I'd love to see comparisons to organizational structures used in aerospace projects. There's nothing like this large scale organization in the industry I work in.

This framework for harnessing cognition reminds me of the original "computers" - humans who did large scale arithmetic calculations prior to the development of log tables. It's easy to imaging who this would map onto a cognitive unit made up of, initially, humans and AIs.

PS. Historical footnote: CERN was where Tim Berners-Lee, working as an independent contractor, led the development of the first web site and browser.

Saturday, December 10, 2011

Is Gingrich our only hope?

Bruce Bartlett, a reformed Republican, says Gingrich is our only hope ...

Economic Experts Gather In DC To Explain Why Politics Has Doomed Us | TPMDC

... The most we can hope for is that a complete crazy person like Newt Gingrich gets the Republican nomination, the Republicans lose so badly that they lose control of the House and don’t get control of the Senate and then maybe in a year we can finally talk about doing something rational ...

Rationalists for Gingrich!

On the topic of reformed Republicans, there's a post deep in my backlog about what a reformed GOP would look like. I hope I get to it someday. Briefly, a reformed GOP would be reality-based, and would respect basic logic and arithmetic. There's lots of room for political debate within a framework of reason ...

Hungary a tyranny?

Krugman delivers an astonishing opinion, almost as a footnote to a blog post ...

Peripheral Stories - Krugman

... And I spent part of yesterday talking with people in Princeton’s Program in Law and Public Affairs, who wanted to talk about Hungary. It’s hair-raising — and not just because of the economics. What will the EU do when one of its members slides into dictatorship?...

The comments come quickly ...

... Orban has established the rule of arbitrary tyranny in one and a half years. He appointed apparatchiks to key posts with unchecked authority for 9 or 12 years. These positions are:

1. Chief Prosecutor, who was given the right to select even the judges for trials of his choosing.

2. Chief Judge, with the right to appoint/promote/demote/dismiss judges

3. Chief of the Media, with the right to take away the licenses of radio stations and fine opposition outlets out of existence.

4. Head of the Financial Control Office.

He also stuffed the Constitutional court with Party and Personal faithful, enlarging it with from 8 to 15, and forbidding the Court to review cases that have anything to do with money.

It took a mere 3 weeks for Orban to push through a new constitution that restricts people's right to hold referendums, to appeal to the Constitutional court.

Hungary lives in fear now. You can be put in detention without trial for up to 3 years. You can be fired for political reasons and the unemployment rate is 12%.

and in response ...

As a Hungarian, let me correct the picture of my country as one "sliding into dictatorship." This is far from reality. Our government is indeed concentrating and extending its power as far as possible in a democratic system and is definitely doing so beyond good taste. Bearing a 2/3 majority they can even modify the constitution and they use this weapon without hesitation and without seeking consensus. This truly weakens our democracy somewhat, so harsh criticism is well deserved, but Hungary is not turning into a dictatorship, this is simply nonsense.

But where is all that nonsense coming from? Well, Hungarian politics is difficult to see clearly for a foreigner. The reason is the huge advantage of the Hungarian left (which is practically an alliance of liberals and former communists) of having a well-built international network which gives them an access to foreign media that the right just does not have. Hence, no matter who is in power, the foreign opinions about Hungarian matters are dominated by leftists' views. The key players in this game are renowned Hungarian leftist intellectuals residing in Western-Europe. Whenever it is not their team in power they always scream dictatorship - that is what they did with earlier conservative governments as well! Oh, and if the left were telling the truth, we would have a right-wing military dictatorship for 17 years by now, as this is what they "forecasted” before the 1994 elections...

Meanwhile, back home, Newt Gingrich must now be considered a real contender for the presidency.

Humanity dances on the edge of the knife. It's a habit.

Friday, December 09, 2011

The Il crime

The use of a font where these two characters have the same appearance is a data crime and should be punished by audit: lI.

Thursday, December 08, 2011

Wikipedia's problem

A marketing firm is caught manipulating Wikipedia. The interesting bit is their response ...
BBC News - Wikipedia investigates PR firm Bell Pottinger's edits
... Lord Bell, chairman of Chime Communications, the owner of Bell Pottinger, said an internal review had been launched.

"I can't see any bad headlines for our clients," he told the BBC. "You won't find anybody, including journalists, who doesn't do exactly the same thing."...
"Everyone does it, so don't look at us."

I hope journalists will dig deeper into the state of Wikipedia and how the "pay-to-edit" problem will be managed going forward. I suspect there are are some reasonable answers, mostly building on Wikipedia's existing frameworks for managing malign edits. Problem is the same as the spam wars and the (new) voice-bot wars -- the costs keep rising.